PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_8574268g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 249aa    MW: 27660.1 Da    PI: 5.4374
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_8574268g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.81.8e-204696155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     + y+GVr+++ +g+Wv+eIr+p   +k++r++lg+f+t+e+Aa+a++ a+  l+g
  MA_8574268g0010 46 PVYRGVRRRS-WGKWVSEIREP---NKKRRIWLGSFDTPEMAARAYDVAAFHLKG 96
                     68*****887.**********9...347**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.7E-144696IPR001471AP2/ERF domain
SMARTSM003803.9E-3547111IPR001471AP2/ERF domain
PROSITE profilePS5103223.89447105IPR001471AP2/ERF domain
SuperFamilySSF541715.43E-2147106IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.3E-3047106IPR001471AP2/ERF domain
PRINTSPR003673.3E-104859IPR001471AP2/ERF domain
CDDcd000181.30E-3248107No hitNo description
PRINTSPR003673.3E-107086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MLNSSTHTEA SSKSASTSKG GIKRIRTQDE AEPSPPQKRT LKLQYPVYRG VRRRSWGKWV  60
SEIREPNKKR RIWLGSFDTP EMAARAYDVA AFHLKGKNYA LLNFPELIDH LPHPISLSPR  120
QIQAAAAEAA AAFISASESA GNSGMSSDVN KQERRSPRNI PVSNERAVPS SSDELSAIIS  180
SDIEKASAEL WGKSDTYTIS SPVWTPVMVE DLFESLNLYT DLAEALMLPP PLFSIDVEVE  240
EQILEEDFL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-1548105360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
3gcc_A1e-1548109667ATERF1
2gcc_A1e-1548109667ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15170RRRSWGKWVSEIREPNKKRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006426907.17e-39hypothetical protein CICLE_v10027587mg
TrEMBLD5ABJ69e-81D5ABJ6_PICSI; Putative uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-35ERF family protein